Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.31■□□□□ 0.2
APLFQ8IW19 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.31■□□□□ 0.2
APLFQ8IW19 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.31■□□□□ 0.2
APLFQ8IW19 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APLFQ8IW19 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
APLFQ8IW19 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.31■□□□□ 0.2
APLFQ8IW19 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.31■□□□□ 0.2
APLFQ8IW19 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
APLFQ8IW19 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
APLFQ8IW19 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
APLFQ8IW19 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 NCF1C-201ENST00000438382 1427 ntBASIC16.3■□□□□ 0.2
APLFQ8IW19 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 CICP4-201ENST00000447359 2812 ntBASIC16.3■□□□□ 0.2
APLFQ8IW19 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.3■□□□□ 0.2
APLFQ8IW19 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 PRSS29P-201ENST00000440800 595 ntBASIC16.3■□□□□ 0.2
APLFQ8IW19 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.3■□□□□ 0.2
APLFQ8IW19 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
APLFQ8IW19 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
APLFQ8IW19 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APLFQ8IW19 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
APLFQ8IW19 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.29■□□□□ 0.2
APLFQ8IW19 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
APLFQ8IW19 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.29■□□□□ 0.2
APLFQ8IW19 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APLFQ8IW19 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
APLFQ8IW19 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.29■□□□□ 0.2
APLFQ8IW19 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms