Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMIM5Q71RC9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 RNA5SP423-201ENST00000517127 109 ntBASIC20.34■□□□□ 0.85
SMIM5Q71RC9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 ABBA01031663.1-201ENST00000635630 790 ntBASIC20.34■□□□□ 0.85
SMIM5Q71RC9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMIM5Q71RC9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 AC091271.1-201ENST00000611877 1162 ntBASIC20.33■□□□□ 0.85
SMIM5Q71RC9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.33■□□□□ 0.85
SMIM5Q71RC9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 KRT8P37-201ENST00000451609 1420 ntBASIC20.33■□□□□ 0.84
SMIM5Q71RC9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMIM5Q71RC9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 MIR326-201ENST00000362220 95 ntBASIC20.32■□□□□ 0.84
SMIM5Q71RC9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 PTP4A1P2-201ENST00000546033 454 ntBASIC20.32■□□□□ 0.84
SMIM5Q71RC9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMIM5Q71RC9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms