Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01559Q495D7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.41□□□□□ -0.42
LINC01559Q495D7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01559Q495D7 INTS4P1-201ENST00000438455 1935 ntBASIC12.41□□□□□ -0.42
LINC01559Q495D7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01559Q495D7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01559Q495D7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC005521.1-201ENST00000393351 872 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 LINC00982-205ENST00000420957 435 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 TERC-201ENST00000602385 541 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC133561.5-201ENST00000635547 218 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AC243591.1-201ENST00000452967 1364 ntBASIC12.4□□□□□ -0.42
LINC01559Q495D7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01559Q495D7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01559Q495D7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01559Q495D7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01559Q495D7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01559Q495D7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.4□□□□□ -0.43
LINC01559Q495D7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01559Q495D7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LINC01559Q495D7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 SIGLEC16-201ENST00000599858 1437 ntBASIC12.39□□□□□ -0.43
LINC01559Q495D7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.39□□□□□ -0.43
LINC01559Q495D7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01559Q495D7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.39□□□□□ -0.43
LINC01559Q495D7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms