Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKL1Q00532 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKL1Q00532 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDKL1Q00532 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDKL1Q00532 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDKL1Q00532 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDKL1Q00532 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL1Q00532 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL1Q00532 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKL1Q00532 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKL1Q00532 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKL1Q00532 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKL1Q00532 AL009183.1-201ENST00000603760 355 ntBASIC16.12■□□□□ 0.17
CDKL1Q00532 BX640515.1-201ENST00000617215 977 ntBASIC16.12■□□□□ 0.17
CDKL1Q00532 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDKL1Q00532 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKL1Q00532 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKL1Q00532 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKL1Q00532 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDKL1Q00532 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDKL1Q00532 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDKL1Q00532 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CDKL1Q00532 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDKL1Q00532 AC140658.5-201ENST00000438532 169 ntBASIC16.11■□□□□ 0.17
CDKL1Q00532 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.11■□□□□ 0.17
CDKL1Q00532 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.11■□□□□ 0.17
CDKL1Q00532 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.11■□□□□ 0.17
CDKL1Q00532 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.11■□□□□ 0.17
CDKL1Q00532 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.11■□□□□ 0.17
CDKL1Q00532 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKL1Q00532 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.11■□□□□ 0.17
CDKL1Q00532 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDKL1Q00532 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
CDKL1Q00532 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.1■□□□□ 0.17
CDKL1Q00532 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms