Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.72□□□□□ -0.05
VBP1P61758 AP002414.1-201ENST00000391405 1147 ntBASIC14.72□□□□□ -0.05
VBP1P61758 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 HLA-F-220ENST00000434407 884 ntBASIC14.72□□□□□ -0.05
VBP1P61758 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.72□□□□□ -0.05
VBP1P61758 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.72□□□□□ -0.05
VBP1P61758 GPR32P1-201ENST00000601788 811 ntBASIC14.72□□□□□ -0.05
VBP1P61758 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 AP001412.1-201ENST00000608405 714 ntBASIC14.72□□□□□ -0.05
VBP1P61758 AL049637.2-201ENST00000641778 930 ntBASIC14.72□□□□□ -0.05
VBP1P61758 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 AC079781.5-202ENST00000641784 3743 ntBASIC14.72□□□□□ -0.05
VBP1P61758 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VBP1P61758 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.72□□□□□ -0.05
VBP1P61758 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VBP1P61758 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
VBP1P61758 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VBP1P61758 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 KLF4P1-201ENST00000412782 1185 ntBASIC14.71□□□□□ -0.05
VBP1P61758 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.71□□□□□ -0.05
VBP1P61758 EGLN1P1-201ENST00000531623 762 ntBASIC14.71□□□□□ -0.05
VBP1P61758 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.71□□□□□ -0.05
VBP1P61758 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.71□□□□□ -0.05
VBP1P61758 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VBP1P61758 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VBP1P61758 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.71□□□□□ -0.05
VBP1P61758 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.71□□□□□ -0.05
VBP1P61758 LINC01144-201ENST00000626198 1710 ntBASIC14.71□□□□□ -0.05
VBP1P61758 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VBP1P61758 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VBP1P61758 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VBP1P61758 AC117489.1-201ENST00000625169 3217 ntBASIC14.71□□□□□ -0.06
VBP1P61758 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.71□□□□□ -0.06
VBP1P61758 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.71□□□□□ -0.06
VBP1P61758 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.71□□□□□ -0.06
VBP1P61758 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.71□□□□□ -0.06
VBP1P61758 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VBP1P61758 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VBP1P61758 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VBP1P61758 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
VBP1P61758 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.7□□□□□ -0.06
VBP1P61758 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.7□□□□□ -0.06
VBP1P61758 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.7□□□□□ -0.06
VBP1P61758 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.7□□□□□ -0.06
VBP1P61758 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VBP1P61758 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.7□□□□□ -0.06
VBP1P61758 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms