Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FOXO1B-201ENST00000504678 1527 ntBASIC15.67■□□□□ 0.1
VSX2P58304 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
VSX2P58304 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VSX2P58304 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VSX2P58304 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.67■□□□□ 0.1
VSX2P58304 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
VSX2P58304 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VSX2P58304 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 AC005622.1-201ENST00000636801 1703 ntBASIC15.66■□□□□ 0.1
VSX2P58304 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 AC005052.1-201ENST00000625181 2492 ntBASIC15.66■□□□□ 0.1
VSX2P58304 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.66■□□□□ 0.1
VSX2P58304 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 SPDYE14P-201ENST00000442619 822 ntBASIC15.66■□□□□ 0.1
VSX2P58304 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.66■□□□□ 0.1
VSX2P58304 AC027796.2-201ENST00000575326 344 ntBASIC15.66■□□□□ 0.1
VSX2P58304 AC106028.4-201ENST00000614509 607 ntBASIC15.66■□□□□ 0.1
VSX2P58304 AP001059.3-201ENST00000619053 235 ntBASIC15.66■□□□□ 0.1
VSX2P58304 Z92544.3-201ENST00000624747 417 ntBASIC15.66■□□□□ 0.1
VSX2P58304 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.66■□□□□ 0.1
VSX2P58304 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.66■□□□□ 0.1
VSX2P58304 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VSX2P58304 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
VSX2P58304 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.65■□□□□ 0.1
VSX2P58304 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.65■□□□□ 0.1
VSX2P58304 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.65■□□□□ 0.1
VSX2P58304 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 AP3S2-216ENST00000617003 1561 ntBASIC15.65■□□□□ 0.1
VSX2P58304 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
VSX2P58304 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.65■□□□□ 0.1
VSX2P58304 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VSX2P58304 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms