Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN12P56749 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 DRAXINP1-201ENST00000437611 948 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 TSSC2-201ENST00000450217 709 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN12P56749 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN12P56749 AC074051.2-201ENST00000565115 352 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 AC005332.1-201ENST00000577698 1310 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN12P56749 SSR4P1-203ENST00000599569 2260 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 AC010654.1-201ENST00000615722 808 ntBASIC14.28□□□□□ -0.12
CLDN12P56749 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN12P56749 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN12P56749 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN12P56749 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 AC016027.1-202ENST00000607927 1699 ntBASIC14.27□□□□□ -0.12
CLDN12P56749 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLDN12P56749 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLDN12P56749 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN12P56749 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN12P56749 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN12P56749 AL365209.1-201ENST00000624418 6473 ntBASIC14.27□□□□□ -0.13
CLDN12P56749 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 AP002383.4-201ENST00000442518 975 ntBASIC14.27□□□□□ -0.13
CLDN12P56749 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 AP002414.4-201ENST00000589764 1148 ntBASIC14.27□□□□□ -0.13
CLDN12P56749 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.27□□□□□ -0.13
CLDN12P56749 AC066615.1-201ENST00000640911 628 ntBASIC14.27□□□□□ -0.13
CLDN12P56749 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN12P56749 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 AC023157.3-201ENST00000619086 2088 ntBASIC14.27□□□□□ -0.13
CLDN12P56749 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CLDN12P56749 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN12P56749 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN12P56749 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CLDN12P56749 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN12P56749 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN12P56749 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 AC006058.4-201ENST00000624016 1670 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms