Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS2P54868 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
HMGCS2P54868 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS2P54868 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HMGCS2P54868 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HMGCS2P54868 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS2P54868 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.7■□□□□ 0.58
HMGCS2P54868 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
HMGCS2P54868 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGCS2P54868 AC234783.1-201ENST00000441761 496 ntBASIC18.7■□□□□ 0.58
HMGCS2P54868 AC104596.2-201ENST00000512793 793 ntBASIC18.7■□□□□ 0.58
HMGCS2P54868 SNX29P1-201ENST00000548357 1007 ntBASIC18.7■□□□□ 0.58
HMGCS2P54868 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.7■□□□□ 0.58
HMGCS2P54868 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.7■□□□□ 0.58
HMGCS2P54868 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HMGCS2P54868 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGCS2P54868 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCS2P54868 CROCCP4-201ENST00000457096 498 ntBASIC18.69■□□□□ 0.58
HMGCS2P54868 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 AC092552.1-201ENST00000547243 906 ntBASIC18.69■□□□□ 0.58
HMGCS2P54868 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCS2P54868 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.69■□□□□ 0.58
HMGCS2P54868 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HMGCS2P54868 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.69■□□□□ 0.58
HMGCS2P54868 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 AP001094.4-201ENST00000579008 2176 ntBASIC18.69■□□□□ 0.58
HMGCS2P54868 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGCS2P54868 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGCS2P54868 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HMGCS2P54868 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCS2P54868 Z97205.2-201ENST00000564697 1639 ntBASIC18.68■□□□□ 0.58
HMGCS2P54868 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCS2P54868 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGCS2P54868 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.68■□□□□ 0.58
HMGCS2P54868 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCS2P54868 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
HMGCS2P54868 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMGCS2P54868 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGCS2P54868 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 HLA-A-202ENST00000376806 1854 ntBASIC18.68■□□□□ 0.58
HMGCS2P54868 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms