Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.97■□□□□ 0.47
PMS1P54277 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.97■□□□□ 0.47
PMS1P54277 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.97■□□□□ 0.47
PMS1P54277 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PMS1P54277 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PMS1P54277 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.97■□□□□ 0.47
PMS1P54277 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.97■□□□□ 0.47
PMS1P54277 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.97■□□□□ 0.47
PMS1P54277 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.97■□□□□ 0.47
PMS1P54277 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PMS1P54277 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.97■□□□□ 0.47
PMS1P54277 BX640515.1-201ENST00000617215 977 ntBASIC17.97■□□□□ 0.47
PMS1P54277 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PMS1P54277 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.97■□□□□ 0.47
PMS1P54277 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.97■□□□□ 0.47
PMS1P54277 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PMS1P54277 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PMS1P54277 OR6D1P-203ENST00000641209 4860 ntBASIC17.97■□□□□ 0.47
PMS1P54277 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.96■□□□□ 0.47
PMS1P54277 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PMS1P54277 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PMS1P54277 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 AC092384.3-202ENST00000564646 2873 ntBASIC17.96■□□□□ 0.47
PMS1P54277 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 AC074386.1-202ENST00000463561 864 ntBASIC17.96■□□□□ 0.47
PMS1P54277 AC106730.1-201ENST00000566722 1090 ntBASIC17.96■□□□□ 0.47
PMS1P54277 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.96■□□□□ 0.47
PMS1P54277 AC140113.2-201ENST00000604370 208 ntBASIC17.96■□□□□ 0.47
PMS1P54277 AC068137.2-201ENST00000605408 478 ntBASIC17.96■□□□□ 0.47
PMS1P54277 AC120114.3-201ENST00000611923 658 ntBASIC17.96■□□□□ 0.47
PMS1P54277 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PMS1P54277 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 AL589702.1-201ENST00000641229 1509 ntBASIC17.96■□□□□ 0.47
PMS1P54277 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PMS1P54277 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PMS1P54277 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.96■□□□□ 0.47
PMS1P54277 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PMS1P54277 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PMS1P54277 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.96■□□□□ 0.46
PMS1P54277 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PMS1P54277 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PMS1P54277 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PMS1P54277 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.95■□□□□ 0.46
PMS1P54277 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.95■□□□□ 0.46
PMS1P54277 AL138918.1-201ENST00000568306 659 ntBASIC17.95■□□□□ 0.46
PMS1P54277 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.95■□□□□ 0.46
PMS1P54277 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.95■□□□□ 0.46
PMS1P54277 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.95■□□□□ 0.46
PMS1P54277 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.95■□□□□ 0.46
PMS1P54277 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PMS1P54277 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PMS1P54277 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms