Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 FAM207CP-201ENST00000443486 507 ntBASIC16.79■□□□□ 0.28
ATXN3P54252 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC140878.1-201ENST00000565277 250 ntBASIC16.79■□□□□ 0.28
ATXN3P54252 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.79■□□□□ 0.28
ATXN3P54252 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC027307.3-201ENST00000594262 1100 ntBASIC16.79■□□□□ 0.28
ATXN3P54252 AL390754.1-201ENST00000619088 582 ntBASIC16.79■□□□□ 0.28
ATXN3P54252 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.79■□□□□ 0.28
ATXN3P54252 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.78■□□□□ 0.28
ATXN3P54252 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 PAUPAR-201ENST00000630360 2965 ntBASIC16.78■□□□□ 0.28
ATXN3P54252 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 PCDHB17P-201ENST00000539533 2393 ntBASIC16.78■□□□□ 0.28
ATXN3P54252 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.78■□□□□ 0.28
ATXN3P54252 SLC25A6P2-201ENST00000497974 877 ntBASIC16.78■□□□□ 0.28
ATXN3P54252 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.78■□□□□ 0.28
ATXN3P54252 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.78■□□□□ 0.28
ATXN3P54252 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
ATXN3P54252 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 AL135999.2-201ENST00000622438 1686 ntBASIC16.78■□□□□ 0.28
ATXN3P54252 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.78■□□□□ 0.28
ATXN3P54252 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATXN3P54252 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATXN3P54252 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.77■□□□□ 0.28
ATXN3P54252 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.77■□□□□ 0.28
ATXN3P54252 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.77■□□□□ 0.28
ATXN3P54252 SLC25A39P2-201ENST00000537614 270 ntBASIC16.77■□□□□ 0.28
ATXN3P54252 DUX4L17-201ENST00000557360 1267 ntBASIC16.77■□□□□ 0.28
ATXN3P54252 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 LINC02560-201ENST00000596379 459 ntBASIC16.77■□□□□ 0.28
ATXN3P54252 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.77■□□□□ 0.28
ATXN3P54252 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATXN3P54252 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATXN3P54252 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.77■□□□□ 0.28
ATXN3P54252 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.77■□□□□ 0.27
ATXN3P54252 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
ATXN3P54252 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
ATXN3P54252 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATXN3P54252 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
ATXN3P54252 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms