Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.81■□□□□ 0.28
ITGA8P53708 AL160237.2-201ENST00000556165 472 ntBASIC16.81■□□□□ 0.28
ITGA8P53708 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.81■□□□□ 0.28
ITGA8P53708 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 AC091304.2-201ENST00000564639 760 ntBASIC16.81■□□□□ 0.28
ITGA8P53708 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.81■□□□□ 0.28
ITGA8P53708 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 AP002414.2-201ENST00000591780 3365 ntBASIC16.81■□□□□ 0.28
ITGA8P53708 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
ITGA8P53708 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ITGA8P53708 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ITGA8P53708 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA8P53708 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ITGA8P53708 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ITGA8P53708 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA8P53708 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.8■□□□□ 0.28
ITGA8P53708 AC136632.2-201ENST00000512891 861 ntBASIC16.8■□□□□ 0.28
ITGA8P53708 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.8■□□□□ 0.28
ITGA8P53708 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.8■□□□□ 0.28
ITGA8P53708 AC008667.4-201ENST00000607370 168 ntBASIC16.8■□□□□ 0.28
ITGA8P53708 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.8■□□□□ 0.28
ITGA8P53708 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.8■□□□□ 0.28
ITGA8P53708 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 AC092919.2-201ENST00000623631 1645 ntBASIC16.8■□□□□ 0.28
ITGA8P53708 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ITGA8P53708 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ITGA8P53708 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.79■□□□□ 0.28
ITGA8P53708 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ITGA8P53708 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ITGA8P53708 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms