Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDE6CP51160 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDE6CP51160 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6CP51160 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDE6CP51160 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDE6CP51160 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.71■□□□□ 0.42
PDE6CP51160 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.71■□□□□ 0.42
PDE6CP51160 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PDE6CP51160 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDE6CP51160 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PDE6CP51160 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDE6CP51160 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.7■□□□□ 0.42
PDE6CP51160 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 FAM86C2P-203ENST00000528684 1004 ntBASIC17.7■□□□□ 0.42
PDE6CP51160 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDE6CP51160 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.7■□□□□ 0.42
PDE6CP51160 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
PDE6CP51160 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 KRT18P28-201ENST00000453838 1332 ntBASIC17.7■□□□□ 0.42
PDE6CP51160 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6CP51160 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.69■□□□□ 0.42
PDE6CP51160 PMS2P4-201ENST00000412466 1052 ntBASIC17.69■□□□□ 0.42
PDE6CP51160 AC140658.5-201ENST00000438532 169 ntBASIC17.69■□□□□ 0.42
PDE6CP51160 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.69■□□□□ 0.42
PDE6CP51160 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PDE6CP51160 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 AC092902.6-201ENST00000641783 218 ntBASIC17.69■□□□□ 0.42
PDE6CP51160 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PDE6CP51160 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PDE6CP51160 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6CP51160 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6CP51160 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms