Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 AC016027.1-202ENST00000607927 1699 ntBASIC13.45□□□□□ -0.26
NKX2-1P43699 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-1P43699 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 SPDYE21P-201ENST00000413323 827 ntBASIC13.45□□□□□ -0.26
NKX2-1P43699 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX2-1P43699 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-1P43699 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX2-1P43699 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX2-1P43699 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX2-1P43699 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 SSR4P1-203ENST00000599569 2260 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 AP003680.1-201ENST00000598970 3660 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 RCN1P1-201ENST00000400413 996 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 TMPOP1-202ENST00000424642 1267 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 AC104076.2-201ENST00000448912 469 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 AC022616.7-201ENST00000525383 220 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX2-1P43699 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX2-1P43699 RN7SL850P-201ENST00000579959 291 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 MPDU1-223ENST00000582151 728 ntBASIC13.44□□□□□ -0.26
NKX2-1P43699 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX2-1P43699 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX2-1P43699 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX2-1P43699 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-1P43699 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NKX2-1P43699 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NKX2-1P43699 AL590787.1-201ENST00000568856 1315 ntBASIC13.43□□□□□ -0.26
NKX2-1P43699 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-1P43699 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-1P43699 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NKX2-1P43699 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX2-1P43699 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-1P43699 INTS4P1-201ENST00000438455 1935 ntBASIC13.43□□□□□ -0.26
NKX2-1P43699 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.43□□□□□ -0.26
NKX2-1P43699 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX2-1P43699 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-1P43699 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX2-1P43699 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms