Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HTTP42858 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
HTTP42858 AC022137.2-201ENST00000503482 481 ntBASIC17.99■□□□□ 0.47
HTTP42858 AP001063.1-201ENST00000568332 529 ntBASIC17.99■□□□□ 0.47
HTTP42858 AP003419.4-201ENST00000616071 517 ntBASIC17.99■□□□□ 0.47
HTTP42858 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.99■□□□□ 0.47
HTTP42858 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.99■□□□□ 0.47
HTTP42858 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HTTP42858 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
HTTP42858 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
HTTP42858 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.99■□□□□ 0.47
HTTP42858 RPL13AP25-201ENST00000484130 612 ntBASIC17.99■□□□□ 0.47
HTTP42858 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HTTP42858 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.99■□□□□ 0.47
HTTP42858 EEF1DP1-201ENST00000585891 896 ntBASIC17.99■□□□□ 0.47
HTTP42858 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HTTP42858 AC134312.5-201ENST00000568031 1313 ntBASIC17.99■□□□□ 0.47
HTTP42858 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HTTP42858 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.98■□□□□ 0.47
HTTP42858 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HTTP42858 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.98■□□□□ 0.47
HTTP42858 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HTTP42858 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HTTP42858 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HTTP42858 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 AC134915.1-201ENST00000426461 574 ntBASIC17.98■□□□□ 0.47
HTTP42858 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
HTTP42858 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HTTP42858 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.98■□□□□ 0.47
HTTP42858 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HTTP42858 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.98■□□□□ 0.47
HTTP42858 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HTTP42858 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.98■□□□□ 0.47
HTTP42858 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.98■□□□□ 0.47
HTTP42858 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HTTP42858 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.98■□□□□ 0.47
HTTP42858 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.98■□□□□ 0.47
HTTP42858 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.98■□□□□ 0.47
HTTP42858 AL133373.2-201ENST00000623187 2828 ntBASIC17.97■□□□□ 0.47
HTTP42858 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.97■□□□□ 0.47
HTTP42858 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HTTP42858 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.97■□□□□ 0.47
HTTP42858 MIR4321-201ENST00000592276 80 ntBASIC17.97■□□□□ 0.47
HTTP42858 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
HTTP42858 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.97■□□□□ 0.47
HTTP42858 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.97■□□□□ 0.47
HTTP42858 LINC02012-201ENST00000608206 1725 ntBASIC17.97■□□□□ 0.47
HTTP42858 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
HTTP42858 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.97■□□□□ 0.47
HTTP42858 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.97■□□□□ 0.47
HTTP42858 FO393414.2-201ENST00000405153 598 ntBASIC17.97■□□□□ 0.47
HTTP42858 VDAC1P7-201ENST00000462417 847 ntBASIC17.97■□□□□ 0.47
HTTP42858 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HTTP42858 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.97■□□□□ 0.47
HTTP42858 AC005052.1-201ENST00000625181 2492 ntBASIC17.97■□□□□ 0.47
HTTP42858 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTTP42858 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.96■□□□□ 0.47
HTTP42858 SPTLC1P5-201ENST00000450718 252 ntBASIC17.96■□□□□ 0.47
HTTP42858 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.96■□□□□ 0.47
HTTP42858 RN7SL574P-201ENST00000581512 297 ntBASIC17.96■□□□□ 0.47
HTTP42858 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.96■□□□□ 0.47
HTTP42858 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.96■□□□□ 0.47
HTTP42858 MIR6756-201ENST00000616240 63 ntBASIC17.96■□□□□ 0.47
HTTP42858 AC244452.3-201ENST00000636814 210 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms