Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 RN7SL837P-201ENST00000463010 287 ntBASIC17.36■□□□□ 0.37
PBX3P40426 ELK1P1-201ENST00000485699 580 ntBASIC17.36■□□□□ 0.37
PBX3P40426 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.36■□□□□ 0.37
PBX3P40426 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.36■□□□□ 0.37
PBX3P40426 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.36■□□□□ 0.37
PBX3P40426 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PBX3P40426 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PBX3P40426 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.36■□□□□ 0.37
PBX3P40426 AC105020.1-201ENST00000435356 2205 ntBASIC17.36■□□□□ 0.37
PBX3P40426 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PBX3P40426 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.36■□□□□ 0.37
PBX3P40426 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PBX3P40426 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PBX3P40426 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PBX3P40426 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PBX3P40426 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PBX3P40426 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 AC123567.1-201ENST00000548294 1261 ntBASIC17.35■□□□□ 0.37
PBX3P40426 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.35■□□□□ 0.37
PBX3P40426 MIR6069-201ENST00000620069 79 ntBASIC17.35■□□□□ 0.37
PBX3P40426 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
PBX3P40426 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PBX3P40426 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.35■□□□□ 0.37
PBX3P40426 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.34■□□□□ 0.37
PBX3P40426 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.34■□□□□ 0.37
PBX3P40426 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 MIR1909-201ENST00000411312 80 ntBASIC17.34■□□□□ 0.37
PBX3P40426 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 ACA64.2-201ENST00000459014 129 ntBASIC17.34■□□□□ 0.37
PBX3P40426 AC011495.1-201ENST00000498085 584 ntBASIC17.34■□□□□ 0.37
PBX3P40426 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.34■□□□□ 0.37
PBX3P40426 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PBX3P40426 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PBX3P40426 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.34■□□□□ 0.37
PBX3P40426 U82695.1-201ENST00000635752 1889 ntBASIC17.34■□□□□ 0.37
PBX3P40426 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PBX3P40426 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.34■□□□□ 0.37
PBX3P40426 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PBX3P40426 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PBX3P40426 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.33■□□□□ 0.37
PBX3P40426 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms