Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDE6BP35913 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDE6BP35913 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 AC004987.2-201ENST00000395959 1148 ntBASIC19.93■□□□□ 0.78
PDE6BP35913 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.93■□□□□ 0.78
PDE6BP35913 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.93■□□□□ 0.78
PDE6BP35913 AC068587.3-201ENST00000526613 355 ntBASIC19.93■□□□□ 0.78
PDE6BP35913 AP000812.2-201ENST00000538934 718 ntBASIC19.93■□□□□ 0.78
PDE6BP35913 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.93■□□□□ 0.78
PDE6BP35913 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.93■□□□□ 0.78
PDE6BP35913 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.93■□□□□ 0.78
PDE6BP35913 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.93■□□□□ 0.78
PDE6BP35913 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 LINC01144-201ENST00000626198 1710 ntBASIC19.93■□□□□ 0.78
PDE6BP35913 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
PDE6BP35913 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDE6BP35913 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDE6BP35913 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDE6BP35913 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6BP35913 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PDE6BP35913 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6BP35913 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6BP35913 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 PFN1P12-201ENST00000455938 534 ntBASIC19.92■□□□□ 0.78
PDE6BP35913 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6BP35913 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 AC108725.1-201ENST00000495472 409 ntBASIC19.92■□□□□ 0.78
PDE6BP35913 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.92■□□□□ 0.78
PDE6BP35913 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.92■□□□□ 0.78
PDE6BP35913 AP001889.1-201ENST00000525414 633 ntBASIC19.92■□□□□ 0.78
PDE6BP35913 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6BP35913 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6BP35913 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.92■□□□□ 0.78
PDE6BP35913 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PDE6BP35913 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6BP35913 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PDE6BP35913 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.92■□□□□ 0.78
PDE6BP35913 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDE6BP35913 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 EEF1DP4-201ENST00000446006 880 ntBASIC19.91■□□□□ 0.78
PDE6BP35913 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.91■□□□□ 0.78
PDE6BP35913 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.91■□□□□ 0.78
PDE6BP35913 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.91■□□□□ 0.78
PDE6BP35913 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.91■□□□□ 0.78
PDE6BP35913 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDE6BP35913 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms