Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RFC1P35251 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
RFC1P35251 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFC1P35251 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 WASH6P-202ENST00000359512 1437 ntBASIC17.25■□□□□ 0.35
RFC1P35251 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 AC002056.1-201ENST00000395613 760 ntBASIC17.25■□□□□ 0.35
RFC1P35251 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.25■□□□□ 0.35
RFC1P35251 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 AL592424.1-201ENST00000563624 1536 ntBASIC17.25■□□□□ 0.35
RFC1P35251 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RFC1P35251 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RFC1P35251 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFC1P35251 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RFC1P35251 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFC1P35251 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RFC1P35251 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RFC1P35251 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RFC1P35251 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 AC093724.1-201ENST00000448659 1027 ntBASIC17.24■□□□□ 0.35
RFC1P35251 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.24■□□□□ 0.35
RFC1P35251 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.24■□□□□ 0.35
RFC1P35251 AC112191.1-201ENST00000523689 701 ntBASIC17.24■□□□□ 0.35
RFC1P35251 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFC1P35251 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.24■□□□□ 0.35
RFC1P35251 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 AC040169.1-201ENST00000565382 521 ntBASIC17.24■□□□□ 0.35
RFC1P35251 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.24■□□□□ 0.35
RFC1P35251 AL161645.1-201ENST00000622716 1255 ntBASIC17.24■□□□□ 0.35
RFC1P35251 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFC1P35251 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.24■□□□□ 0.35
RFC1P35251 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFC1P35251 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.23■□□□□ 0.35
RFC1P35251 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RFC1P35251 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.23■□□□□ 0.35
RFC1P35251 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.23■□□□□ 0.35
RFC1P35251 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms