Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
VARSP26640 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 AC087641.1-201ENST00000557561 1021 ntBASIC16.15■□□□□ 0.18
VARSP26640 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.15■□□□□ 0.18
VARSP26640 SNHG9-202ENST00000564014 471 ntBASIC16.15■□□□□ 0.18
VARSP26640 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.15■□□□□ 0.18
VARSP26640 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.15■□□□□ 0.18
VARSP26640 AL512652.2-201ENST00000625156 1716 ntBASIC16.15■□□□□ 0.18
VARSP26640 MTHFR-217ENST00000641820 1569 ntBASIC16.15■□□□□ 0.18
VARSP26640 AL139011.1-202ENST00000642063 584 ntBASIC16.15■□□□□ 0.18
VARSP26640 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
VARSP26640 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
VARSP26640 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.14■□□□□ 0.17
VARSP26640 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 KRT8P39-201ENST00000396270 1433 ntBASIC16.14■□□□□ 0.17
VARSP26640 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 HCG4B-203ENST00000450128 991 ntBASIC16.14■□□□□ 0.17
VARSP26640 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.14■□□□□ 0.17
VARSP26640 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.14■□□□□ 0.17
VARSP26640 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.14■□□□□ 0.17
VARSP26640 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VARSP26640 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.17
VARSP26640 KRT18P28-201ENST00000453838 1332 ntBASIC16.14■□□□□ 0.17
VARSP26640 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VARSP26640 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 DBET-201ENST00000630918 3363 ntBASIC16.13■□□□□ 0.17
VARSP26640 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VARSP26640 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.13■□□□□ 0.17
VARSP26640 AC254562.1-201ENST00000417586 456 ntBASIC16.13■□□□□ 0.17
VARSP26640 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.13■□□□□ 0.17
VARSP26640 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.13■□□□□ 0.17
VARSP26640 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.13■□□□□ 0.17
VARSP26640 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.13■□□□□ 0.17
VARSP26640 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.13■□□□□ 0.17
VARSP26640 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.13■□□□□ 0.17
VARSP26640 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.13■□□□□ 0.17
VARSP26640 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.13■□□□□ 0.17
VARSP26640 AC064836.3-201ENST00000607928 673 ntBASIC16.13■□□□□ 0.17
VARSP26640 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.13■□□□□ 0.17
VARSP26640 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.13■□□□□ 0.17
VARSP26640 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VARSP26640 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms