Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.92□□□□□ -0.02
CD53P19397 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD53P19397 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD53P19397 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.91□□□□□ -0.02
CD53P19397 PDPK2P-202ENST00000562415 1191 ntBASIC14.91□□□□□ -0.02
CD53P19397 AL031432.2-201ENST00000566714 459 ntBASIC14.91□□□□□ -0.02
CD53P19397 AL928711.1-201ENST00000570165 459 ntBASIC14.91□□□□□ -0.02
CD53P19397 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 AC011467.4-201ENST00000594891 528 ntBASIC14.91□□□□□ -0.02
CD53P19397 AC027612.4-201ENST00000605371 583 ntBASIC14.91□□□□□ -0.02
CD53P19397 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 AC010654.1-201ENST00000615722 808 ntBASIC14.91□□□□□ -0.02
CD53P19397 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.91□□□□□ -0.02
CD53P19397 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CD53P19397 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CD53P19397 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD53P19397 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.9□□□□□ -0.02
CD53P19397 AC079328.2-201ENST00000561241 3354 ntBASIC14.9□□□□□ -0.02
CD53P19397 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 AC022532.1-201ENST00000624563 1728 ntBASIC14.9□□□□□ -0.02
CD53P19397 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 KLF4P1-201ENST00000412782 1185 ntBASIC14.9□□□□□ -0.02
CD53P19397 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.9□□□□□ -0.02
CD53P19397 ACTG1P4-201ENST00000425123 1122 ntBASIC14.9□□□□□ -0.02
CD53P19397 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.9□□□□□ -0.02
CD53P19397 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 SIGLEC30P-201ENST00000455569 941 ntBASIC14.9□□□□□ -0.02
CD53P19397 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.9□□□□□ -0.02
CD53P19397 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CD53P19397 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.9□□□□□ -0.02
CD53P19397 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.9□□□□□ -0.02
CD53P19397 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CD53P19397 AC004877.2-201ENST00000623941 599 ntBASIC14.9□□□□□ -0.02
CD53P19397 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms