Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.58■□□□□ 0.4
SYN1P17600 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 SCARNA20.5-201ENST00000516991 142 ntBASIC17.58■□□□□ 0.4
SYN1P17600 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.58■□□□□ 0.4
SYN1P17600 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SYN1P17600 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.58■□□□□ 0.4
SYN1P17600 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.58■□□□□ 0.4
SYN1P17600 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.58■□□□□ 0.4
SYN1P17600 SPCS2P2-201ENST00000603270 608 ntBASIC17.58■□□□□ 0.4
SYN1P17600 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SYN1P17600 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.58■□□□□ 0.4
SYN1P17600 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.58■□□□□ 0.4
SYN1P17600 AC116353.5-201ENST00000638148 1699 ntBASIC17.58■□□□□ 0.4
SYN1P17600 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SYN1P17600 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 TUBB8P12-201ENST00000308911 1335 ntBASIC17.57■□□□□ 0.4
SYN1P17600 TUBB7P-202ENST00000428444 1305 ntBASIC17.57■□□□□ 0.4
SYN1P17600 TUBB8P7-204ENST00000567960 1332 ntBASIC17.57■□□□□ 0.4
SYN1P17600 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 C1QBPP1-201ENST00000400117 770 ntBASIC17.57■□□□□ 0.4
SYN1P17600 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.57■□□□□ 0.4
SYN1P17600 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.57■□□□□ 0.4
SYN1P17600 AC023310.1-201ENST00000554836 735 ntBASIC17.57■□□□□ 0.4
SYN1P17600 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.57■□□□□ 0.4
SYN1P17600 MIR4741-201ENST00000579822 90 ntBASIC17.57■□□□□ 0.4
SYN1P17600 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.57■□□□□ 0.4
SYN1P17600 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SYN1P17600 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SYN1P17600 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.57■□□□□ 0.4
SYN1P17600 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 AC138028.6-201ENST00000616106 1482 ntBASIC17.56■□□□□ 0.4
SYN1P17600 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
SYN1P17600 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SYN1P17600 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SYN1P17600 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.56■□□□□ 0.4
SYN1P17600 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SYN1P17600 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.56■□□□□ 0.4
SYN1P17600 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 AC093433.1-201ENST00000458048 571 ntBASIC17.56■□□□□ 0.4
SYN1P17600 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.56■□□□□ 0.4
SYN1P17600 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.56■□□□□ 0.4
SYN1P17600 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.56■□□□□ 0.4
SYN1P17600 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.56■□□□□ 0.4
SYN1P17600 AC005695.3-201ENST00000614522 232 ntBASIC17.56■□□□□ 0.4
SYN1P17600 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms