Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC008894.3-201ENST00000624324 3103 ntBASIC17.3■□□□□ 0.36
CCDC130P13994 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC130P13994 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC130P13994 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC130P13994 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
CCDC130P13994 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC130P13994 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC130P13994 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC130P13994 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC130P13994 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC130P13994 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC130P13994 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC130P13994 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC130P13994 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC130P13994 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC130P13994 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC130P13994 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC130P13994 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC130P13994 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC130P13994 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC130P13994 RFPL4AP1-201ENST00000530883 850 ntBASIC17.29■□□□□ 0.36
CCDC130P13994 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC130P13994 MIR4453-201ENST00000584019 89 ntBASIC17.29■□□□□ 0.36
CCDC130P13994 AC018529.1-201ENST00000613063 361 ntBASIC17.29■□□□□ 0.36
CCDC130P13994 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC130P13994 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC130P13994 AC046158.3-201ENST00000624947 2558 ntBASIC17.29■□□□□ 0.36
CCDC130P13994 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC130P13994 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC130P13994 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC130P13994 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC130P13994 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC130P13994 CNN2P2-201ENST00000443536 909 ntBASIC17.28■□□□□ 0.36
CCDC130P13994 FAM86GP-201ENST00000448322 971 ntBASIC17.28■□□□□ 0.36
CCDC130P13994 CNN2P3-201ENST00000450201 906 ntBASIC17.28■□□□□ 0.36
CCDC130P13994 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC130P13994 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC130P13994 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC130P13994 AC003101.2-201ENST00000612557 442 ntBASIC17.28■□□□□ 0.36
CCDC130P13994 AL136317.3-201ENST00000618497 906 ntBASIC17.28■□□□□ 0.36
CCDC130P13994 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC130P13994 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC130P13994 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC130P13994 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC130P13994 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC130P13994 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CCDC130P13994 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC130P13994 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCDC130P13994 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC130P13994 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC130P13994 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC130P13994 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC130P13994 AL592424.1-201ENST00000563624 1536 ntBASIC17.27■□□□□ 0.36
CCDC130P13994 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC130P13994 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC130P13994 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC130P13994 CROCCP1-201ENST00000426910 5675 ntBASIC17.27■□□□□ 0.36
CCDC130P13994 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC130P13994 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms