Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.22■□□□□ 0.51
RARBP10826 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.22■□□□□ 0.51
RARBP10826 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 TIMM17BP1-201ENST00000545713 516 ntBASIC18.22■□□□□ 0.51
RARBP10826 AP005482.1-201ENST00000563722 1273 ntBASIC18.22■□□□□ 0.51
RARBP10826 AC092337.1-201ENST00000568699 1129 ntBASIC18.22■□□□□ 0.51
RARBP10826 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.22■□□□□ 0.51
RARBP10826 WFDC1-204ENST00000613603 549 ntBASIC18.22■□□□□ 0.51
RARBP10826 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.22■□□□□ 0.51
RARBP10826 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.22■□□□□ 0.51
RARBP10826 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
RARBP10826 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.22■□□□□ 0.51
RARBP10826 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RARBP10826 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARBP10826 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 AC080080.1-201ENST00000625121 2420 ntBASIC18.21■□□□□ 0.51
RARBP10826 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.21■□□□□ 0.51
RARBP10826 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.21■□□□□ 0.51
RARBP10826 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.21■□□□□ 0.51
RARBP10826 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.21■□□□□ 0.51
RARBP10826 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.21■□□□□ 0.51
RARBP10826 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.21■□□□□ 0.51
RARBP10826 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RARBP10826 TMEM261P1-201ENST00000604899 340 ntBASIC18.21■□□□□ 0.51
RARBP10826 AC133552.6-201ENST00000613406 534 ntBASIC18.21■□□□□ 0.51
RARBP10826 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 GPAA1P2-202ENST00000606848 1787 ntBASIC18.21■□□□□ 0.51
RARBP10826 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARBP10826 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
RARBP10826 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
RARBP10826 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
RARBP10826 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RARBP10826 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RARBP10826 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.2■□□□□ 0.5
RARBP10826 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RARBP10826 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.2■□□□□ 0.5
RARBP10826 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
RARBP10826 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.2■□□□□ 0.5
RARBP10826 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.2■□□□□ 0.5
RARBP10826 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.2■□□□□ 0.5
RARBP10826 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.2■□□□□ 0.5
RARBP10826 KRT223P-202ENST00000449164 1292 ntBASIC18.2■□□□□ 0.5
RARBP10826 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.2■□□□□ 0.5
RARBP10826 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.2■□□□□ 0.5
RARBP10826 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.2■□□□□ 0.5
RARBP10826 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.2■□□□□ 0.5
RARBP10826 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 MIR4259-201ENST00000584466 101 ntBASIC18.2■□□□□ 0.5
RARBP10826 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RARBP10826 AC074044.1-201ENST00000609673 707 ntBASIC18.2■□□□□ 0.5
RARBP10826 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.2■□□□□ 0.5
RARBP10826 COX11-210ENST00000639671 696 ntBASIC18.2■□□□□ 0.5
RARBP10826 AL033527.5-201ENST00000641382 801 ntBASIC18.2■□□□□ 0.5
RARBP10826 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RARBP10826 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms