Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.31□□□□□ -0.12
SFTPBP07988 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 TOP3BP1-201ENST00000420768 1380 ntBASIC14.31□□□□□ -0.12
SFTPBP07988 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.31□□□□□ -0.12
SFTPBP07988 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.31□□□□□ -0.12
SFTPBP07988 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SFTPBP07988 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.3□□□□□ -0.12
SFTPBP07988 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 AC105339.3-201ENST00000560043 636 ntBASIC14.3□□□□□ -0.12
SFTPBP07988 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.3□□□□□ -0.12
SFTPBP07988 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 ME2P1-201ENST00000426028 1970 ntBASIC14.3□□□□□ -0.12
SFTPBP07988 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.3□□□□□ -0.12
SFTPBP07988 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.3□□□□□ -0.12
SFTPBP07988 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SFTPBP07988 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.29□□□□□ -0.12
SFTPBP07988 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.29□□□□□ -0.12
SFTPBP07988 PTCHD3P3-201ENST00000403073 906 ntBASIC14.29□□□□□ -0.12
SFTPBP07988 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.29□□□□□ -0.12
SFTPBP07988 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.29□□□□□ -0.12
SFTPBP07988 IGHV3-22-201ENST00000520721 359 ntBASIC14.29□□□□□ -0.12
SFTPBP07988 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.29□□□□□ -0.12
SFTPBP07988 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 AL671883.3-201ENST00000603274 991 ntBASIC14.29□□□□□ -0.12
SFTPBP07988 AL139011.1-202ENST00000642063 584 ntBASIC14.29□□□□□ -0.12
SFTPBP07988 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SFTPBP07988 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.29□□□□□ -0.12
SFTPBP07988 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SFTPBP07988 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms