Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.1■□□□□ 0.97
COL5A2P05997 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 AC068880.1-201ENST00000507289 2297 ntBASIC21.1■□□□□ 0.97
COL5A2P05997 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 HLA-A-202ENST00000376806 1854 ntBASIC21.1■□□□□ 0.97
COL5A2P05997 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
COL5A2P05997 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.1■□□□□ 0.97
COL5A2P05997 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC21.1■□□□□ 0.97
COL5A2P05997 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.1■□□□□ 0.97
COL5A2P05997 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC21.1■□□□□ 0.97
COL5A2P05997 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.1■□□□□ 0.97
COL5A2P05997 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.1■□□□□ 0.97
COL5A2P05997 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
COL5A2P05997 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
COL5A2P05997 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.1■□□□□ 0.97
COL5A2P05997 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
COL5A2P05997 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL5A2P05997 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL5A2P05997 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.09■□□□□ 0.97
COL5A2P05997 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 AC025279.2-201ENST00000569730 653 ntBASIC21.09■□□□□ 0.97
COL5A2P05997 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.09■□□□□ 0.97
COL5A2P05997 RETN-203ENST00000629642 400 ntTSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.09■□□□□ 0.97
COL5A2P05997 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.09■□□□□ 0.97
COL5A2P05997 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.09■□□□□ 0.97
COL5A2P05997 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL5A2P05997 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
COL5A2P05997 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
COL5A2P05997 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.08■□□□□ 0.97
COL5A2P05997 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.08■□□□□ 0.97
COL5A2P05997 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
COL5A2P05997 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
COL5A2P05997 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.08■□□□□ 0.97
COL5A2P05997 PCDHB18P-201ENST00000524813 2368 ntBASIC21.08■□□□□ 0.97
COL5A2P05997 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL5A2P05997 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.08■□□□□ 0.97
COL5A2P05997 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.08■□□□□ 0.97
COL5A2P05997 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL5A2P05997 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
COL5A2P05997 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.08■□□□□ 0.96
COL5A2P05997 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.08■□□□□ 0.96
COL5A2P05997 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL5A2P05997 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
COL5A2P05997 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL5A2P05997 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 POU5F1P6-201ENST00000466990 990 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.07■□□□□ 0.96
COL5A2P05997 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.07■□□□□ 0.96
COL5A2P05997 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.07■□□□□ 0.96
COL5A2P05997 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL5A2P05997 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC21.07■□□□□ 0.96
COL5A2P05997 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.07■□□□□ 0.96
COL5A2P05997 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL5A2P05997 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 236.6 ms