Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BRF1-202ENST00000379932 884 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 CYP46A4P-201ENST00000414953 267 ntBASIC9.97□□□□□ -0.81
APOBP04114 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 AL133499.1-201ENST00000596207 608 ntBASIC9.97□□□□□ -0.81
APOBP04114 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC9.97□□□□□ -0.81
APOBP04114 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
APOBP04114 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
APOBP04114 TP73-209ENST00000603362 1668 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 AC067852.2-201ENST00000590513 2313 ntBASIC9.97□□□□□ -0.81
APOBP04114 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
APOBP04114 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC9.97□□□□□ -0.81
APOBP04114 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC9.97□□□□□ -0.81
APOBP04114 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC9.97□□□□□ -0.81
APOBP04114 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC9.97□□□□□ -0.81
APOBP04114 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC9.97□□□□□ -0.81
APOBP04114 RPL13AP25-201ENST00000484130 612 ntBASIC9.97□□□□□ -0.81
APOBP04114 AC022137.2-201ENST00000503482 481 ntBASIC9.97□□□□□ -0.81
APOBP04114 AC091812.3-201ENST00000621362 345 ntBASIC9.97□□□□□ -0.81
APOBP04114 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC9.96□□□□□ -0.81
APOBP04114 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
APOBP04114 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC9.96□□□□□ -0.81
APOBP04114 AC104596.2-201ENST00000512793 793 ntBASIC9.96□□□□□ -0.81
APOBP04114 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC9.96□□□□□ -0.81
APOBP04114 EEF1DP1-201ENST00000585891 896 ntBASIC9.96□□□□□ -0.81
APOBP04114 MIR6756-201ENST00000616240 63 ntBASIC9.96□□□□□ -0.81
APOBP04114 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
APOBP04114 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC9.96□□□□□ -0.81
APOBP04114 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC9.96□□□□□ -0.81
APOBP04114 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
APOBP04114 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 CMC1-204ENST00000423894 549 ntTSL 2 BASIC9.96□□□□□ -0.81
APOBP04114 C2orf27AP3-201ENST00000434123 579 ntBASIC9.96□□□□□ -0.81
APOBP04114 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 AL590640.2-201ENST00000457038 527 ntBASIC9.96□□□□□ -0.81
APOBP04114 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
APOBP04114 AL354718.3-201ENST00000616414 581 ntBASIC9.96□□□□□ -0.81
APOBP04114 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.96□□□□□ -0.81
APOBP04114 CR382287.1-201ENST00000623954 586 ntBASIC9.96□□□□□ -0.81
APOBP04114 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
APOBP04114 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
APOBP04114 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC9.96□□□□□ -0.81
APOBP04114 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 PKIG-203ENST00000372887 769 ntTSL 3 BASIC9.96□□□□□ -0.82
APOBP04114 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC9.96□□□□□ -0.82
APOBP04114 AC093813.1-201ENST00000605066 256 ntBASIC9.96□□□□□ -0.82
APOBP04114 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
APOBP04114 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
APOBP04114 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC9.96□□□□□ -0.82
APOBP04114 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 ARTN-209ENST00000479128 471 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 RERG-205ENST00000537647 935 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 CYGB-203ENST00000589145 788 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms