Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC108860.2-201ENST00000562760 2183 ntBASIC14.74□□□□□ -0.05
SPTA1P02549 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.74□□□□□ -0.05
SPTA1P02549 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.74□□□□□ -0.05
SPTA1P02549 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SPTA1P02549 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.74□□□□□ -0.05
SPTA1P02549 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.74□□□□□ -0.05
SPTA1P02549 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SPTA1P02549 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.74□□□□□ -0.05
SPTA1P02549 AC104596.2-201ENST00000512793 793 ntBASIC14.74□□□□□ -0.05
SPTA1P02549 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.74□□□□□ -0.05
SPTA1P02549 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.74□□□□□ -0.05
SPTA1P02549 AL391069.4-201ENST00000609583 481 ntBASIC14.74□□□□□ -0.05
SPTA1P02549 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.74□□□□□ -0.05
SPTA1P02549 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SPTA1P02549 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.74□□□□□ -0.05
SPTA1P02549 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.74□□□□□ -0.05
SPTA1P02549 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SPTA1P02549 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SPTA1P02549 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 RPL13AP20-201ENST00000459725 609 ntBASIC14.73□□□□□ -0.05
SPTA1P02549 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 AL008638.5-201ENST00000623814 1298 ntBASIC14.73□□□□□ -0.05
SPTA1P02549 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.73□□□□□ -0.05
SPTA1P02549 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.73□□□□□ -0.05
SPTA1P02549 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.73□□□□□ -0.05
SPTA1P02549 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.73□□□□□ -0.05
SPTA1P02549 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 HYMAI-201ENST00000635591 3347 ntBASIC14.73□□□□□ -0.05
SPTA1P02549 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.73□□□□□ -0.05
SPTA1P02549 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.73□□□□□ -0.05
SPTA1P02549 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 AC090164.3-201ENST00000610780 2143 ntBASIC14.73□□□□□ -0.05
SPTA1P02549 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SPTA1P02549 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.72□□□□□ -0.05
SPTA1P02549 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.72□□□□□ -0.05
SPTA1P02549 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SPTA1P02549 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.72□□□□□ -0.05
SPTA1P02549 TDH-203ENST00000531764 1110 ntBASIC14.72□□□□□ -0.05
SPTA1P02549 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.72□□□□□ -0.05
SPTA1P02549 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SPTA1P02549 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.72□□□□□ -0.05
SPTA1P02549 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPTA1P02549 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SPTA1P02549 AC018470.1-201ENST00000624790 3129 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms