Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CLDN11O75508 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN11O75508 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN11O75508 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 AC055876.3-201ENST00000431496 288 ntBASIC16.64■□□□□ 0.25
CLDN11O75508 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN11O75508 AL139010.1-201ENST00000454878 894 ntBASIC16.64■□□□□ 0.25
CLDN11O75508 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN11O75508 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.64■□□□□ 0.25
CLDN11O75508 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.64■□□□□ 0.25
CLDN11O75508 AC138649.4-201ENST00000612222 287 ntBASIC16.64■□□□□ 0.25
CLDN11O75508 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN11O75508 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.64■□□□□ 0.25
CLDN11O75508 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CLDN11O75508 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLDN11O75508 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.64■□□□□ 0.25
CLDN11O75508 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDN11O75508 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 MIR770-201ENST00000390219 98 ntBASIC16.63■□□□□ 0.25
CLDN11O75508 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CLDN11O75508 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN11O75508 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 TREML5P-201ENST00000421694 576 ntBASIC16.63■□□□□ 0.25
CLDN11O75508 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN11O75508 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 MTND6P24-201ENST00000440466 518 ntBASIC16.63■□□□□ 0.25
CLDN11O75508 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CLDN11O75508 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 HLA-V-204ENST00000476601 1289 ntBASIC16.63■□□□□ 0.25
CLDN11O75508 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.63■□□□□ 0.25
CLDN11O75508 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CLDN11O75508 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.63■□□□□ 0.25
CLDN11O75508 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN11O75508 FO538757.1-201ENST00000623083 1397 ntBASIC16.63■□□□□ 0.25
CLDN11O75508 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN11O75508 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN11O75508 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN11O75508 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN11O75508 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN11O75508 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN11O75508 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN11O75508 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN11O75508 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN11O75508 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN11O75508 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms