Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.76■□□□□ 0.11
CPNE3O75131 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
CPNE3O75131 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 MIR346-201ENST00000362234 95 ntBASIC15.76■□□□□ 0.11
CPNE3O75131 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 AC093214.1-201ENST00000511688 1107 ntBASIC15.76■□□□□ 0.11
CPNE3O75131 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 AC105233.2-201ENST00000523697 349 ntBASIC15.76■□□□□ 0.11
CPNE3O75131 AF228730.5-201ENST00000530288 346 ntBASIC15.76■□□□□ 0.11
CPNE3O75131 ALG1L8P-201ENST00000533887 760 ntBASIC15.76■□□□□ 0.11
CPNE3O75131 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.76■□□□□ 0.11
CPNE3O75131 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CPNE3O75131 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CPNE3O75131 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE3O75131 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE3O75131 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE3O75131 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 MIR943-201ENST00000401286 94 ntBASIC15.75■□□□□ 0.11
CPNE3O75131 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE3O75131 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE3O75131 AC013467.2-201ENST00000605472 835 ntBASIC15.75■□□□□ 0.11
CPNE3O75131 AC012183.1-201ENST00000625197 499 ntBASIC15.75■□□□□ 0.11
CPNE3O75131 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE3O75131 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE3O75131 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE3O75131 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE3O75131 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE3O75131 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 AC092053.1-201ENST00000605787 1936 ntBASIC15.74■□□□□ 0.11
CPNE3O75131 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CPNE3O75131 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE3O75131 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE3O75131 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms