Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 AL139400.1-201ENST00000366220 510 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
OPHN1O60890 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.13■□□□□ 0.33
OPHN1O60890 AC025678.2-201ENST00000562061 970 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
OPHN1O60890 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 GGT3P-204ENST00000453783 1664 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 SLC22A20-204ENST00000530038 1673 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.12■□□□□ 0.33
OPHN1O60890 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
OPHN1O60890 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
OPHN1O60890 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.12■□□□□ 0.33
OPHN1O60890 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.12■□□□□ 0.33
OPHN1O60890 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.12■□□□□ 0.33
OPHN1O60890 AC023141.13-201ENST00000604991 943 ntBASIC17.12■□□□□ 0.33
OPHN1O60890 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 AL512652.2-201ENST00000625156 1716 ntBASIC17.12■□□□□ 0.33
OPHN1O60890 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
OPHN1O60890 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 AC025580.3-201ENST00000617932 1424 ntBASIC17.12■□□□□ 0.33
OPHN1O60890 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
OPHN1O60890 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OPHN1O60890 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 AC126755.1-201ENST00000525846 6405 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 RHOQP3-201ENST00000437982 621 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.11■□□□□ 0.33
OPHN1O60890 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.11■□□□□ 0.33
OPHN1O60890 CYP2A7P1-201ENST00000595391 815 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 AC091812.2-201ENST00000619081 385 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 AP001350.2-201ENST00000625104 1094 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms