Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2A1O14983 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATP2A1O14983 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATP2A1O14983 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2A1O14983 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 AC087499.6-201ENST00000411576 835 ntBASIC18.62■□□□□ 0.57
ATP2A1O14983 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2A1O14983 DOC2GP-202ENST00000514950 1163 ntBASIC18.62■□□□□ 0.57
ATP2A1O14983 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2A1O14983 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.62■□□□□ 0.57
ATP2A1O14983 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATP2A1O14983 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2A1O14983 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP2A1O14983 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.62■□□□□ 0.57
ATP2A1O14983 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATP2A1O14983 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.62■□□□□ 0.57
ATP2A1O14983 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.62■□□□□ 0.57
ATP2A1O14983 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP2A1O14983 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATP2A1O14983 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATP2A1O14983 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A1O14983 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATP2A1O14983 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
ATP2A1O14983 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ATP2A1O14983 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.61■□□□□ 0.57
ATP2A1O14983 GK-202ENST00000378941 458 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP2A1O14983 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 SPDYE18-201ENST00000510091 1050 ntBASIC18.61■□□□□ 0.57
ATP2A1O14983 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.61■□□□□ 0.57
ATP2A1O14983 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.61■□□□□ 0.57
ATP2A1O14983 SRD5A3P1-201ENST00000603021 949 ntBASIC18.61■□□□□ 0.57
ATP2A1O14983 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATP2A1O14983 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATP2A1O14983 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.61■□□□□ 0.57
ATP2A1O14983 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A1O14983 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ATP2A1O14983 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A1O14983 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 SPDYE19P-201ENST00000338590 713 ntBASIC18.6■□□□□ 0.57
ATP2A1O14983 AC098614.1-201ENST00000368528 745 ntBASIC18.6■□□□□ 0.57
ATP2A1O14983 FO393414.2-201ENST00000405153 598 ntBASIC18.6■□□□□ 0.57
ATP2A1O14983 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ATP2A1O14983 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms