Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CASQ2O14958 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.58■□□□□ 0.08
CASQ2O14958 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.58■□□□□ 0.08
CASQ2O14958 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CASQ2O14958 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 LINC01144-201ENST00000626198 1710 ntBASIC15.57■□□□□ 0.08
CASQ2O14958 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CASQ2O14958 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.57■□□□□ 0.08
CASQ2O14958 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 UNC93B2-201ENST00000285383 730 ntBASIC15.57■□□□□ 0.08
CASQ2O14958 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.57■□□□□ 0.08
CASQ2O14958 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
CASQ2O14958 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.57■□□□□ 0.08
CASQ2O14958 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.57■□□□□ 0.08
CASQ2O14958 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.57■□□□□ 0.08
CASQ2O14958 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CASQ2O14958 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.57■□□□□ 0.08
CASQ2O14958 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.57■□□□□ 0.08
CASQ2O14958 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CASQ2O14958 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.57■□□□□ 0.08
CASQ2O14958 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.57■□□□□ 0.08
CASQ2O14958 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CASQ2O14958 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.56■□□□□ 0.08
CASQ2O14958 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 INGX-201ENST00000359239 846 ntBASIC15.56■□□□□ 0.08
CASQ2O14958 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CASQ2O14958 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 RBM17P1-201ENST00000453646 1190 ntBASIC15.56■□□□□ 0.08
CASQ2O14958 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.56■□□□□ 0.08
CASQ2O14958 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.56■□□□□ 0.08
CASQ2O14958 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.56■□□□□ 0.08
CASQ2O14958 AC026471.5-201ENST00000615068 467 ntBASIC15.56■□□□□ 0.08
CASQ2O14958 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 PGM5P2-202ENST00000637225 1043 ntBASIC15.56■□□□□ 0.08
CASQ2O14958 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CASQ2O14958 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.56■□□□□ 0.08
CASQ2O14958 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CASQ2O14958 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms