Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 PMS2P7-201ENST00000506558 1336 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.05□□□□□ -0.48
NACAE9PAV3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.05□□□□□ -0.48
NACAE9PAV3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.05□□□□□ -0.48
NACAE9PAV3 AP002490.2-201ENST00000524791 560 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.05□□□□□ -0.48
NACAE9PAV3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 AL139424.1-201ENST00000607572 797 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
NACAE9PAV3 FAM215A-202ENST00000632077 792 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 AC006504.4-201ENST00000592118 1568 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
NACAE9PAV3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 AC104109.2-201ENST00000602919 1418 ntBASIC12.05□□□□□ -0.48
NACAE9PAV3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NACAE9PAV3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
NACAE9PAV3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 AC131009.4-201ENST00000624048 1740 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 LINC00982-205ENST00000420957 435 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 BX842568.4-201ENST00000421222 227 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 AC004832.2-201ENST00000426397 482 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 AL591424.1-201ENST00000442569 1213 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.04□□□□□ -0.48
NACAE9PAV3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.04□□□□□ -0.48
NACAE9PAV3 REXO1L3P-201ENST00000622202 1288 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 PCDHA1-201ENST00000378133 2726 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
NACAE9PAV3 CYP2T1P-202ENST00000641596 2535 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.04□□□□□ -0.48
NACAE9PAV3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 MIR1233-2-201ENST00000408138 82 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 MIR1233-1-201ENST00000408722 82 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 AC108751.1-201ENST00000490852 363 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 AC105339.3-201ENST00000560043 636 ntBASIC12.04□□□□□ -0.48
NACAE9PAV3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.04□□□□□ -0.48
NACAE9PAV3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.04□□□□□ -0.48
NACAE9PAV3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NACAE9PAV3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NACAE9PAV3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms