Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 CU639417.3-201ENST00000624240 1404 ntBASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNPO2Q9UMS6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 AD000864.1-201ENST00000624076 2295 ntBASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 MIR648-201ENST00000385046 94 ntBASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 COX5BP8-201ENST00000416911 349 ntBASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 GNAQP1-201ENST00000444815 1067 ntBASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 RN7SL692P-201ENST00000464677 288 ntBASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPO2Q9UMS6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.64■□□□□ 0.58
SYNPO2Q9UMS6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AZGP1P1-201ENST00000411909 902 ntBASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AC005034.1-201ENST00000426657 489 ntBASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 RPL13P2-201ENST00000440687 659 ntBASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNPO2Q9UMS6 AC138932.1-201ENST00000534164 6830 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 MEIS3P1-201ENST00000495167 958 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 TPRX2P-201ENST00000535362 881 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 TIMM17BP1-201ENST00000545713 516 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 HCG11-201ENST00000411553 5696 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 AC006449.6-201ENST00000612330 2296 ntBASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNPO2Q9UMS6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms