Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 RNPS1P1-201ENST00000507437 918 ntBASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SLC52A3Q9NQ40 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 AP003680.1-201ENST00000598970 3660 ntBASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 HCG4P8-203ENST00000443049 980 ntBASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 AC245100.5-201ENST00000452108 331 ntBASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC52A3Q9NQ40 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC52A3Q9NQ40 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC52A3Q9NQ40 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.46■□□□□ 0.06
SLC52A3Q9NQ40 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
SLC52A3Q9NQ40 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 AC018712.1-201ENST00000455767 687 ntBASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 CXCL1P1-201ENST00000502804 216 ntBASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 KRT126P-201ENST00000549467 1181 ntBASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 AC105339.3-201ENST00000560043 636 ntBASIC15.45■□□□□ 0.06
SLC52A3Q9NQ40 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms