Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AF228730.7-201ENST00000641842 219 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 AC099063.4-201ENST00000641099 1602 ntBASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CHRDL1Q9BU40 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 TOP3BP1-201ENST00000420768 1380 ntBASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CHRDL1Q9BU40 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 KRT18P67-201ENST00000432816 1264 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC018712.1-201ENST00000455767 687 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AF186996.4-201ENST00000467186 377 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC136632.2-201ENST00000512891 861 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC008735.5-201ENST00000623544 497 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 AC148477.8-201ENST00000624298 468 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 C8orf49-201ENST00000525043 1968 ntBASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHRDL1Q9BU40 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AC006277.1-201ENST00000624348 1610 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AC004870.1-201ENST00000315132 882 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 SLC25A6P2-201ENST00000497974 877 ntBASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHRDL1Q9BU40 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms