Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 AC013268.4-201ENST00000637413 2228 ntBASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HDHD3Q9BSH5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AF238378.1-201ENST00000526806 358 ntBASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AC005412.3-201ENST00000580309 715 ntBASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AC107918.4-202ENST00000641623 219 ntBASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 AC005622.1-201ENST00000636801 1703 ntBASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HDHD3Q9BSH5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 HCG4-201ENST00000418983 998 ntBASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 RPS2P1-201ENST00000434010 821 ntBASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 DUSP5P1-201ENST00000441325 1139 ntBASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 AC020765.3-201ENST00000613051 740 ntBASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HDHD3Q9BSH5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms