Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL13Q99616 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CCL13Q99616 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
CCL13Q99616 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL13Q99616 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL13Q99616 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.72□□□□□ -0.21
CCL13Q99616 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 AC139530.3-201ENST00000620344 690 ntBASIC13.72□□□□□ -0.21
CCL13Q99616 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL13Q99616 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.72□□□□□ -0.21
CCL13Q99616 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CCL13Q99616 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CCL13Q99616 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 PCDHB19P-201ENST00000570871 2371 ntBASIC13.72□□□□□ -0.21
CCL13Q99616 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CCL13Q99616 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.72□□□□□ -0.21
CCL13Q99616 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL13Q99616 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL13Q99616 CNN2P11-201ENST00000429351 262 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 AC093724.1-201ENST00000448659 1027 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 DNAJB3-202ENST00000449667 1266 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 AP000344.2-201ENST00000512987 629 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.71□□□□□ -0.21
CCL13Q99616 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.71□□□□□ -0.21
CCL13Q99616 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CCL13Q99616 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 AC004835.2-201ENST00000603762 682 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 AC079781.4-201ENST00000641908 219 ntBASIC13.71□□□□□ -0.21
CCL13Q99616 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
CCL13Q99616 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.71□□□□□ -0.21
CCL13Q99616 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCL13Q99616 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.22
CCL13Q99616 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL13Q99616 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL13Q99616 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL13Q99616 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCL13Q99616 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCL13Q99616 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CCL13Q99616 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.71□□□□□ -0.22
CCL13Q99616 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCL13Q99616 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms