Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CSMD1Q96PZ7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 Z93015.1-201ENST00000451718 390 ntBASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 SERBP1P3-201ENST00000459980 809 ntBASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.73□□□□□ -0.21
CSMD1Q96PZ7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 KRT8P22-201ENST00000562317 1415 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 TOP3BP1-201ENST00000420768 1380 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 RNF216P1-203ENST00000404404 2427 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 AP003419.4-201ENST00000616071 517 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 MPDU1-223ENST00000582151 728 ntBASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.72□□□□□ -0.21
CSMD1Q96PZ7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms