Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC126177.1-201ENST00000547829 2218 ntBASIC12.46□□□□□ -0.42
AP1S3Q96PC3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 AL441883.1-201ENST00000566170 1045 ntBASIC12.45□□□□□ -0.42
AP1S3Q96PC3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 AL390719.2-201ENST00000606993 987 ntBASIC12.45□□□□□ -0.42
AP1S3Q96PC3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
AP1S3Q96PC3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SLC25A3P1-201ENST00000443844 931 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 TSPY15P-201ENST00000457163 923 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 STK25P1-201ENST00000585406 838 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 AC005332.3-201ENST00000589904 676 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
AP1S3Q96PC3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms