Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC055876.3-201ENST00000431496 288 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 HMGN1P19-201ENST00000436976 333 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 MTND6P24-201ENST00000440466 518 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC245100.5-201ENST00000452108 331 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 IGHV3-42-201ENST00000520410 361 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AL390955.2-201ENST00000603032 514 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 RN7SL828P-201ENST00000607615 303 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC138649.4-201ENST00000612222 287 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC073592.8-201ENST00000624126 511 ntBASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.14■□□□□ 0.34
SMARCD1Q96GM5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 SPDYE12P-201ENST00000618416 771 ntBASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
SMARCD1Q96GM5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AC092580.3-201ENST00000430932 139 ntBASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 HLA-V-204ENST00000476601 1289 ntBASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AC097493.3-201ENST00000509725 367 ntBASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AC093214.1-201ENST00000511688 1107 ntBASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 AL133215.2-201ENST00000609242 977 ntBASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.13■□□□□ 0.33
SMARCD1Q96GM5 CETN4P-206ENST00000642099 2168 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms