Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 RNU1-129P-201ENST00000384064 167 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 OR7E14P-202ENST00000530490 1290 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 U1.21-201ENST00000580816 167 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 MIR4515-201ENST00000584082 81 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AC021097.1-201ENST00000607902 574 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 ACTL9-202ENST00000612068 1252 ntBASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC44A1Q8WWI5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 RPS2P1-201ENST00000434010 821 ntBASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 AC020658.6-201ENST00000623564 1870 ntBASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC44A1Q8WWI5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 FER1L4-210ENST00000615531 5998 ntBASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 FAM185BP-201ENST00000443595 716 ntBASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms