Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SMIM4Q8WVI0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 AC131009.4-201ENST00000624048 1740 ntBASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.02□□□□□ -0.16
SMIM4Q8WVI0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.02□□□□□ -0.17
SMIM4Q8WVI0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 SIGLEC16-201ENST00000599858 1437 ntBASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 TSPY20P-201ENST00000450910 630 ntBASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AC090616.6-201ENST00000582640 721 ntBASIC14.01□□□□□ -0.17
SMIM4Q8WVI0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms