Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 TOP3BP1-201ENST00000420768 1380 ntBASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.68■□□□□ 0.58
U2AF1L4Q8WU68 CROCCP1-201ENST00000426910 5675 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 KRT18P34-201ENST00000488218 1270 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 MIR4538-201ENST00000581377 78 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 MIR6775-201ENST00000617557 69 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 AC106886.4-201ENST00000623557 2502 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 SLC7A15P-201ENST00000424028 1363 ntBASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2AF1L4Q8WU68 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 AL080243.2-201ENST00000418783 582 ntBASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 AC021097.1-201ENST00000607902 574 ntBASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 AC068587.10-201ENST00000641210 219 ntBASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2AF1L4Q8WU68 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 SLC25A1P3-201ENST00000395415 828 ntBASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TMEM14DP-201ENST00000422205 345 ntBASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 AL079307.3-201ENST00000556114 283 ntBASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2AF1L4Q8WU68 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms