Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 IGHV3-42-201ENST00000520410 361 ntBASIC17.55■□□□□ 0.4
BEST2Q8NFU1 AC105021.1-202ENST00000570572 669 ntBASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
BEST2Q8NFU1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AC005052.1-201ENST00000625181 2492 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AL592424.1-201ENST00000563624 1536 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 MTND6P24-201ENST00000440466 518 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 RNA5SP421-201ENST00000516864 134 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 MIR4321-201ENST00000592276 80 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AC026979.3-201ENST00000607315 403 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 RN7SL828P-201ENST00000607615 303 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AC073592.8-201ENST00000624126 511 ntBASIC17.54■□□□□ 0.4
BEST2Q8NFU1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BEST2Q8NFU1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 AC097493.3-201ENST00000509725 367 ntBASIC17.53■□□□□ 0.4
BEST2Q8NFU1 AC093214.1-201ENST00000511688 1107 ntBASIC17.53■□□□□ 0.4
BEST2Q8NFU1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 AJ011932.1-201ENST00000621707 465 ntBASIC17.53■□□□□ 0.4
BEST2Q8NFU1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms