Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TTC9CQ8N5M4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 MED15P5-201ENST00000423150 992 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 KRT18P34-201ENST00000488218 1270 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 SLC25A1P1-201ENST00000528351 927 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 PDPK2P-202ENST00000562415 1191 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC140113.2-201ENST00000604370 208 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AL161645.1-201ENST00000622716 1255 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC006449.6-201ENST00000612330 2296 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC005622.1-201ENST00000636801 1703 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 AC026691.1-201ENST00000602502 2017 ntBASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TTC9CQ8N5M4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 AL365209.1-201ENST00000624418 6473 ntBASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.97□□□□□ -0.33
TTC9CQ8N5M4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms