Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 TOMM22P5-201ENST00000416399 439 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AC007969.1-201ENST00000433675 447 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AL591846.1-201ENST00000451736 433 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 RPL13AP25-201ENST00000484130 612 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AC244452.3-201ENST00000636814 210 ntBASIC20.22■□□□□ 0.83
COL23A1Q86Y22 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL23A1Q86Y22 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 EEF1DP4-201ENST00000446006 880 ntBASIC20.21■□□□□ 0.83
COL23A1Q86Y22 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 AC005077.2-201ENST00000449786 690 ntBASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 AC008764.6-201ENST00000595909 2069 ntBASIC20.21■□□□□ 0.83
COL23A1Q86Y22 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL23A1Q86Y22 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 KRT8P37-201ENST00000451609 1420 ntBASIC20.2■□□□□ 0.82
COL23A1Q86Y22 AL691432.1-201ENST00000596308 1422 ntBASIC20.2■□□□□ 0.82
COL23A1Q86Y22 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 EIF4HP1-201ENST00000453115 687 ntBASIC20.2■□□□□ 0.82
COL23A1Q86Y22 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 AC023310.1-201ENST00000554836 735 ntBASIC20.2■□□□□ 0.82
COL23A1Q86Y22 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.2■□□□□ 0.82
COL23A1Q86Y22 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms