Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SPTLC1P1-201ENST00000447199 261 ntBASIC18.2■□□□□ 0.5
TRIM50Q86XT4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 AL035252.4-201ENST00000624174 288 ntBASIC18.2■□□□□ 0.5
TRIM50Q86XT4 AC004840.1-201ENST00000636359 365 ntBASIC18.2■□□□□ 0.5
TRIM50Q86XT4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 AL512361.1-201ENST00000554200 418 ntBASIC18.19■□□□□ 0.5
TRIM50Q86XT4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM50Q86XT4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AC011270.2-201ENST00000624293 2550 ntBASIC18.18■□□□□ 0.5
TRIM50Q86XT4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AC005225.4-201ENST00000557330 545 ntBASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM50Q86XT4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms