Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC006538.1-201ENST00000567905 1585 ntBASIC14.38□□□□□ -0.11
C11orf88Q6PI97 MTHFR-217ENST00000641820 1569 ntBASIC14.38□□□□□ -0.11
C11orf88Q6PI97 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C11orf88Q6PI97 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 FOSL1P1-201ENST00000511041 816 ntBASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AC064862.7-201ENST00000604520 867 ntBASIC14.37□□□□□ -0.11
C11orf88Q6PI97 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AC124864.1-201ENST00000623408 392 ntBASIC14.37□□□□□ -0.11
C11orf88Q6PI97 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C11orf88Q6PI97 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 FDX1P1-201ENST00000449115 551 ntBASIC14.36□□□□□ -0.11
C11orf88Q6PI97 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 AC099336.1-202ENST00000602961 463 ntBASIC14.36□□□□□ -0.11
C11orf88Q6PI97 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C11orf88Q6PI97 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C11orf88Q6PI97 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms