Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC254562.1-201ENST00000417586 456 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AP006288.1-201ENST00000446065 395 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 KRT8P48-201ENST00000515599 1220 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC055717.3-201ENST00000622967 595 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC008267.7-201ENST00000624570 1194 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AC134684.3-201ENST00000641758 218 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 MST1L-201ENST00000442552 2185 ntBASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
LDLRAP1Q5SW96 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LDLRAP1Q5SW96 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AC079140.1-201ENST00000508039 487 ntBASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 PRYP6-201ENST00000514804 343 ntBASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 KRT8P23-201ENST00000560090 1207 ntBASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AL513210.1-201ENST00000629608 234 ntBASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LDLRAP1Q5SW96 AC092171.3-201ENST00000610122 2651 ntBASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 POU5F1P6-201ENST00000466990 990 ntBASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms