Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRRK2Q5S007 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.96□□□□□ -0.17
LRRK2Q5S007 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 EEF1DP4-201ENST00000446006 880 ntBASIC13.96□□□□□ -0.17
LRRK2Q5S007 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AC025279.2-201ENST00000569730 653 ntBASIC13.96□□□□□ -0.17
LRRK2Q5S007 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 RN7SL574P-201ENST00000581512 297 ntBASIC13.96□□□□□ -0.17
LRRK2Q5S007 YRDCP1-201ENST00000621419 643 ntBASIC13.96□□□□□ -0.17
LRRK2Q5S007 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRRK2Q5S007 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.96□□□□□ -0.17
LRRK2Q5S007 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 FO393414.2-201ENST00000405153 598 ntBASIC13.96□□□□□ -0.18
LRRK2Q5S007 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.96□□□□□ -0.18
LRRK2Q5S007 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRK2Q5S007 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 CYP46A4P-201ENST00000414953 267 ntBASIC13.95□□□□□ -0.18
LRRK2Q5S007 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 REXO1L8P-201ENST00000604378 1897 ntBASIC13.95□□□□□ -0.18
LRRK2Q5S007 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms